{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 48468878, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47002395, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.97, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 57770478, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55742374, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.49, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 41050193, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 821737, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.020018
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 49033241, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 931301, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.018993
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 41046157, 
            "distinct_read_pairs": 40301463, 
            "one_read_pair": 39646372, 
            "two_read_pair": 638736, 
            "NRF": 0.981857, 
            "PBC1": 0.983745, 
            "PBC2": 62.070045
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 48976834, 
            "distinct_read_pairs": 48123760, 
            "one_read_pair": 47372609, 
            "two_read_pair": 733592, 
            "NRF": 0.982582, 
            "PBC1": 0.984391, 
            "PBC2": 64.576234
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 40228456, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40228456, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 48101940, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48101940, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 3932, 
        "Np": 0, 
        "N_opt": 3932, 
        "N_consv": 3932, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.175341222544523, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1892647, 
            "argmin_corr": 1500, 
            "min_corr": 0.1717936, 
            "NSC": 1.020651, 
            "RSC": 0.2030585
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0205229320175
        }, 
        "rep1-pr1": {
            "FRiP": 0.0176695436309
        }, 
        "rep1-pr2": {
            "FRiP": 0.0177019117158
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.00289425868733
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.330962799856, 
            "auc": 0.493574363491, 
            "ch_div": 0.102162038962, 
            "elbow_pt": 1.76820674045e-207, 
            "jsd": 0.504488420076, 
            "syn_auc": 0.507647656378, 
            "syn_elbow_pt": 0.0330791674506, 
            "syn_jsd": 0.188733723745
        }
    ]
}
