{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 40147781, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35874888, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 89.36, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 22474833, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20917116, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.07, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 28524259, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2178514, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.076374
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 15625642, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 155721, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.009966
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 28521951, 
            "distinct_read_pairs": 26349908, 
            "one_read_pair": 24470565, 
            "two_read_pair": 1652449, 
            "NRF": 0.923847, 
            "PBC1": 0.928677, 
            "PBC2": 14.808666
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 15609118, 
            "distinct_read_pairs": 15462386, 
            "one_read_pair": 15320816, 
            "two_read_pair": 139648, 
            "NRF": 0.9906, 
            "PBC1": 0.990844, 
            "PBC2": 109.710243
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 26345745, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26345745, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 15469921, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 15469921, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 56437, 
        "Np": 0, 
        "N_opt": 56437, 
        "N_consv": 56437, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 130, 
            "corr_est_frag_len": 0.209752107682814, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2062862, 
            "argmin_corr": 1500, 
            "min_corr": 0.1901039, 
            "NSC": 1.103355, 
            "RSC": 1.214178
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.236177330235
        }, 
        "rep1-pr1": {
            "FRiP": 0.264708072834
        }, 
        "rep1-pr2": {
            "FRiP": 0.264688485782
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.224124308845
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.175631108377, 
            "auc": 0.488581496767, 
            "ch_div": 0.226671118451, 
            "elbow_pt": 7.05084459446e-65, 
            "jsd": 0.720749179286, 
            "syn_auc": 0.497306678411, 
            "syn_elbow_pt": 0.257328353991, 
            "syn_jsd": 0.407154927177
        }
    ]
}