{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 99183240, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 96818154, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.62, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 183689087, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 176722432, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.21, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 85918572, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2684952, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.03125
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 156346520, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 17720764, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.113343
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 85899430, 
            "distinct_read_pairs": 83238986, 
            "one_read_pair": 80885706, 
            "two_read_pair": 2282185, 
            "NRF": 0.969028, 
            "PBC1": 0.971729, 
            "PBC2": 35.442221
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 156179233, 
            "distinct_read_pairs": 138682004, 
            "one_read_pair": 123541781, 
            "two_read_pair": 13327256, 
            "NRF": 0.887967, 
            "PBC1": 0.890828, 
            "PBC2": 9.269859
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 83233620, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 83233620, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 138625756, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 138625756, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 10003, 
        "Np": 0, 
        "N_opt": 10003, 
        "N_consv": 10003, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 155, 
            "corr_est_frag_len": 0.175637681466119, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1866003, 
            "argmin_corr": 1500, 
            "min_corr": 0.1722725, 
            "NSC": 1.019534, 
            "RSC": 0.2348686
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0345132937429
        }, 
        "rep1-pr1": {
            "FRiP": 0.0256574230711
        }, 
        "rep1-pr2": {
            "FRiP": 0.0256180106981
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.00961899235046
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.345864333181, 
            "auc": 0.49553941213, 
            "ch_div": 0.100669960154, 
            "elbow_pt": 0.0, 
            "jsd": 0.480877845731, 
            "syn_auc": 0.49761374319, 
            "syn_elbow_pt": 0.0546324434324, 
            "syn_jsd": 0.172010764474
        }
    ]
}