{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 88431467, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 77809376, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 87.99, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 89795671, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 53608612, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 59.7, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 61264555, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4570370, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.074601
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 42380146, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2989169, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.070532
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 61250673, 
            "distinct_read_pairs": 56692876, 
            "one_read_pair": 52449285, 
            "two_read_pair": 3963585, 
            "NRF": 0.925588, 
            "PBC1": 0.925148, 
            "PBC2": 13.232789
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 42355704, 
            "distinct_read_pairs": 39387227, 
            "one_read_pair": 36671024, 
            "two_read_pair": 2523410, 
            "NRF": 0.929916, 
            "PBC1": 0.931038, 
            "PBC2": 14.532329
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 56694185, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56694185, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 39390977, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39390977, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 58819, 
        "Np": 0, 
        "N_opt": 58819, 
        "N_consv": 58819, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.17540560161349, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1818519, 
            "argmin_corr": 1500, 
            "min_corr": 0.1718109, 
            "NSC": 1.020922, 
            "RSC": 0.3580005
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.110979219567
        }, 
        "rep1-pr1": {
            "FRiP": 0.124709272818
        }, 
        "rep1-pr2": {
            "FRiP": 0.12483589952
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0913848399294
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.263392537847, 
            "auc": 0.49242112149, 
            "ch_div": 0.126097361534, 
            "elbow_pt": 1.00401662937e-148, 
            "jsd": 0.597620442363, 
            "syn_auc": 0.500792889058, 
            "syn_elbow_pt": 0.0849032808574, 
            "syn_jsd": 0.289179225498
        }
    ]
}