{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 124461268, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 122932588, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.77, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 89441591, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 87510565, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.84, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 101882302, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 26528310, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.260382
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 77929130, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3128008, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.040139
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 101869527, 
            "distinct_read_pairs": 78758089, 
            "one_read_pair": 65569376, 
            "two_read_pair": 7883806, 
            "NRF": 0.773127, 
            "PBC1": 0.832541, 
            "PBC2": 8.31697
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 77730441, 
            "distinct_read_pairs": 74794742, 
            "one_read_pair": 72125171, 
            "two_read_pair": 2577947, 
            "NRF": 0.962232, 
            "PBC1": 0.964308, 
            "PBC2": 27.977756
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 75353992, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 75353992, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 74801122, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 74801122, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 66403, 
        "Np": 0, 
        "N_opt": 66403, 
        "N_consv": 66403, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.364325429612638, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.3203039, 
            "argmin_corr": 1500, 
            "min_corr": 0.2039052, 
            "NSC": 1.786739, 
            "RSC": 1.378196
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.487082334368
        }, 
        "rep1-pr1": {
            "FRiP": 0.480713446276
        }, 
        "rep1-pr2": {
            "FRiP": 0.481090452301
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.479266274554
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.154969233173, 
            "auc": 0.49324680812, 
            "ch_div": 0.132347149109, 
            "elbow_pt": 1.09322872254e-187, 
            "jsd": 0.862748587, 
            "syn_auc": 0.501741076982, 
            "syn_elbow_pt": 0.426816348164, 
            "syn_jsd": 0.523468121303
        }
    ]
}
