{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 135611652, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 133247532, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.26, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 73683734, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 70012841, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.02, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 107439875, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 19710062, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.183452
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 52416264, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4327527, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.082561
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 107415218, 
            "distinct_read_pairs": 88343526, 
            "one_read_pair": 73428729, 
            "two_read_pair": 11800833, 
            "NRF": 0.822449, 
            "PBC1": 0.831173, 
            "PBC2": 6.222334
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 52305521, 
            "distinct_read_pairs": 48491163, 
            "one_read_pair": 45027965, 
            "two_read_pair": 3177590, 
            "NRF": 0.927075, 
            "PBC1": 0.928581, 
            "PBC2": 14.170477
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 87729813, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 87729813, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 48088737, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48088737, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 117440, 
        "Np": 0, 
        "N_opt": 117440, 
        "N_consv": 117440, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.230157000291672, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2265762, 
            "argmin_corr": 1500, 
            "min_corr": 0.1998529, 
            "NSC": 1.151632, 
            "RSC": 1.133996
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.513923986534
        }, 
        "rep1-pr1": {
            "FRiP": 0.519431552851
        }, 
        "rep1-pr2": {
            "FRiP": 0.519206484782
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.507463290252
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.149076142039, 
            "auc": 0.493754773254, 
            "ch_div": 0.132241599575, 
            "elbow_pt": 9.8480233312e-220, 
            "jsd": 0.849389123581, 
            "syn_auc": 0.502610883376, 
            "syn_elbow_pt": 0.399250372393, 
            "syn_jsd": 0.515434767864
        }
    ]
}