/EXTERNAL ENCODE/K005722_K005707_2_lane_gembs/ENCFF251FLW_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1878229288 | 100.00 % | 939114644 | 100.00 % | 939114644 | 100.00 % |
| General Reads | 1845023669 | 98.23 % | 927634273 | 98.78 % | 917389396 | 97.69 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3133635 | 0.17 % | 1574768 | 0.17 % | 1558867 | 0.17 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 30071984 | 1.60 % | 9905603 | 1.05 % | 20166381 | 2.15 % |
| Bisulfite_reads C2T | 939860602 | 50.04 % | 472385642 | 50.30 % | 467474960 | 49.78 % |
| Bisulfite_reads G2A | 908296702 | 48.36 % | 456823399 | 48.64 % | 451473303 | 48.07 % |
| Concept | Value |
|---|---|
| Unique Fragments | 636371254 |
| Average Unique | 67.76 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 110206963111 | 38.86 % | 47444180276 | 33.46 % | 62762782835 | 44.26 % |
| Base Counts Overall C | 30461784491 | 10.74 % | 1916236584 | 1.35 % | 28545547907 | 20.13 % |
| Base Counts Overall G | 30887859686 | 10.89 % | 28428809838 | 20.05 % | 2459049848 | 1.73 % |
| Base Counts Overall T | 110140358981 | 38.83 % | 63059350305 | 44.47 % | 47081008676 | 33.20 % |
| Base Counts Overall N | 1915656219 | 0.68 % | 957734241 | 0.68 % | 957921978 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9911945932957946 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 709758195 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 939114644 |
| 150 | 939114644 |
| Insert Size Histogram |
|---|
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