/EXTERNAL ENCODE/K005722_K005707_2_lane_gembs/ENCFF327QCK_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1860086438 | 100.00 % | 930043219 | 100.00 % | 930043219 | 100.00 % |
| General Reads | 1830197601 | 98.39 % | 919790768 | 98.90 % | 910406833 | 97.89 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4745634 | 0.26 % | 2383347 | 0.26 % | 2362287 | 0.25 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 25143203 | 1.35 % | 7869104 | 0.85 % | 17274099 | 1.86 % |
| Bisulfite_reads C2T | 933449260 | 50.18 % | 468964132 | 50.42 % | 464485128 | 49.94 % |
| Bisulfite_reads G2A | 901493975 | 48.47 % | 453209983 | 48.73 % | 448283992 | 48.20 % |
| Concept | Value |
|---|---|
| Unique Fragments | 640812095 |
| Average Unique | 68.90 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 109351621141 | 38.93 % | 47192421387 | 33.60 % | 62159199754 | 44.26 % |
| Base Counts Overall C | 29950889493 | 10.66 % | 1666893731 | 1.19 % | 28283995762 | 20.14 % |
| Base Counts Overall G | 30513002541 | 10.86 % | 28281117600 | 20.14 % | 2231884941 | 1.59 % |
| Base Counts Overall T | 109162705838 | 38.87 % | 62352033528 | 44.40 % | 46810672310 | 33.33 % |
| Base Counts Overall N | 1894833125 | 0.67 % | 944059823 | 0.67 % | 950773302 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9913285781483503 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 714152477 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 930043219 |
| 150 | 930043219 |
| Insert Size Histogram |
|---|
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