{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 46519834, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 45591577, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 123758134, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 120019996, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.98, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 42462347, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2468526, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.058134
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 106450311, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 9906676, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.093064
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 42457903, 
            "distinct_read_pairs": 40012338, 
            "one_read_pair": 37810000, 
            "two_read_pair": 2005703, 
            "NRF": 0.9424, 
            "PBC1": 0.944959, 
            "PBC2": 18.851246
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 105588924, 
            "distinct_read_pairs": 96546089, 
            "one_read_pair": 88745200, 
            "two_read_pair": 6854149, 
            "NRF": 0.914358, 
            "PBC1": 0.9192, 
            "PBC2": 12.947661
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 39993821, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39993821, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 96543635, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 96543635, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 72479, 
        "Np": 0, 
        "N_opt": 72479, 
        "N_consv": 72479, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.2391696370956, 
            "phantom_peak": 80, 
            "corr_phantom_peak": 0.2283971, 
            "argmin_corr": 1500, 
            "min_corr": 0.1935225, 
            "NSC": 1.235875, 
            "RSC": 1.308894
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.454728905417
        }, 
        "rep1-pr1": {
            "FRiP": 0.432910259841
        }, 
        "rep1-pr2": {
            "FRiP": 0.433235563642
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.427490677083
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.166894204634, 
            "auc": 0.493580029315, 
            "ch_div": 0.137108995454, 
            "elbow_pt": 7.58709111649e-208, 
            "jsd": 0.815444654588, 
            "syn_auc": 0.510400976167, 
            "syn_elbow_pt": 0.385799950579, 
            "syn_jsd": 0.478626900266
        }
    ]
}