{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 47003217, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44700238, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.1, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 26631737, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25552953, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.95, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 37996713, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1333088, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.035084
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 22750880, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 514046, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.022595
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 37975535, 
            "distinct_read_pairs": 36654647, 
            "one_read_pair": 35451011, 
            "two_read_pair": 1163483, 
            "NRF": 0.965217, 
            "PBC1": 0.967163, 
            "PBC2": 30.469728
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 22683432, 
            "distinct_read_pairs": 22219193, 
            "one_read_pair": 21796687, 
            "two_read_pair": 412000, 
            "NRF": 0.979534, 
            "PBC1": 0.980985, 
            "PBC2": 52.90458
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 36663625, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36663625, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 22236834, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22236834, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 36409, 
        "Np": 0, 
        "N_opt": 36409, 
        "N_consv": 36409, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.174287350251741, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1932885, 
            "argmin_corr": 1500, 
            "min_corr": 0.1704531, 
            "NSC": 1.022494, 
            "RSC": 0.1679069
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0373766308624
        }, 
        "rep1-pr1": {
            "FRiP": 0.0871281733441
        }, 
        "rep1-pr2": {
            "FRiP": 0.0873005058896
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0267893857325
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.284790313998, 
            "auc": 0.493286255414, 
            "ch_div": 0.11236689632, 
            "elbow_pt": 6.54070739171e-190, 
            "jsd": 0.582129418962, 
            "syn_auc": 0.499253626396, 
            "syn_elbow_pt": 0.0647088908798, 
            "syn_jsd": 0.257776492532
        }
    ]
}