{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 124697314, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 123222621, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.82, 
            "paired": 124697314, 
            "paired_qc_failed": 0, 
            "read1": 62348657, 
            "read1_qc_failed": 0, 
            "read2": 62348657, 
            "read2_qc_failed": 0, 
            "paired_properly": 121054050, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.08, 
            "with_itself": 122438014, 
            "with_itself_qc_failed": 0, 
            "singletons": 784607, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.63, 
            "diff_chroms": 101506, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 98018842, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 96270768, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.22, 
            "paired": 98018842, 
            "paired_qc_failed": 0, 
            "read1": 49009421, 
            "read1_qc_failed": 0, 
            "read2": 49009421, 
            "read2_qc_failed": 0, 
            "paired_properly": 94403324, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.31, 
            "with_itself": 95481141, 
            "with_itself_qc_failed": 0, 
            "singletons": 789627, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.81, 
            "diff_chroms": 119737, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 52655922, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 752261, 
            "paired_opt_dupes": 1013, 
            "dupes_pct": 0.014286
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 40573634, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 190324, 
            "paired_opt_dupes": 892, 
            "dupes_pct": 0.004691
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 52627090, 
            "distinct_read_pairs": 51876885, 
            "one_read_pair": 51140267, 
            "two_read_pair": 724804, 
            "NRF": 0.985745, 
            "PBC1": 0.985801, 
            "PBC2": 70.557374
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 40559437, 
            "distinct_read_pairs": 40369743, 
            "one_read_pair": 40192163, 
            "two_read_pair": 172878, 
            "NRF": 0.995323, 
            "PBC1": 0.995601, 
            "PBC2": 232.488593
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 103807322, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 103807322, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 103807322, 
            "paired_qc_failed": 0, 
            "read1": 51903661, 
            "read1_qc_failed": 0, 
            "read2": 51903661, 
            "read2_qc_failed": 0, 
            "paired_properly": 103807322, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 103807322, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 80766620, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80766620, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 80766620, 
            "paired_qc_failed": 0, 
            "read1": 40383310, 
            "read1_qc_failed": 0, 
            "read2": 40383310, 
            "read2_qc_failed": 0, 
            "paired_properly": 80766620, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 80766620, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 168091, 
        "Np": 0, 
        "N_opt": 168091, 
        "N_consv": 168091, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.175037855110688, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1759337, 
            "argmin_corr": 1500, 
            "min_corr": 0.1682113, 
            "NSC": 1.040583, 
            "RSC": 0.8839931
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.175134345959
        }, 
        "rep1-pr1": {
            "FRiP": 0.186757971556
        }, 
        "rep1-pr2": {
            "FRiP": 0.186571086784
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.112861689501
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.282169531356, 
            "auc": 0.495869664884, 
            "ch_div": 0.101493229586, 
            "elbow_pt": 0.0, 
            "jsd": 0.604245178342, 
            "syn_auc": 0.501721677898, 
            "syn_elbow_pt": 0.0634440856596, 
            "syn_jsd": 0.274991903724
        }
    ]
}