/CEMT/B33200_1_lane_gembs

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SAMPLE B33200_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 959117542 100.00 % 479558771 100.00 % 479558771 100.00 %
General Reads 940485963 98.06 % 473651908 98.77 % 466834055 97.35 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 8491813 0.89 % 4266843 0.89 % 4224970 0.88 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 10139766 1.06 % 1640020 0.34 % 8499746 1.77 %
Bisulfite_reads C2T 483277279 50.39 % 243209179 50.72 % 240068100 50.06 %
Bisulfite_reads G2A 465700497 48.56 % 234709572 48.94 % 230990925 48.17 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 407430488
Average Unique 84.96 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 56673740494 39.13 % 25818904084 35.65 % 30854836410 42.61 %
Base Counts Overall C 15209513021 10.50 % 641994428 0.89 % 14567518593 20.12 %
Base Counts Overall G 15480978688 10.69 % 14729546001 20.34 % 751432687 1.04 %
Base Counts Overall T 56486016613 39.00 % 30737579429 42.45 % 25748437184 35.56 %
Base Counts Overall N 976500026 0.67 % 485350479 0.67 % 491149547 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9942717630977865
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 456583859



Mapping Quality

Mapping Quality Histogram
B33200_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
B33200_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
H75C7CCX2_1_2