{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 52507926, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51982809, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.0, 
            "paired": 52507926, 
            "paired_qc_failed": 0, 
            "read1": 26253963, 
            "read1_qc_failed": 0, 
            "read2": 26253963, 
            "read2_qc_failed": 0, 
            "paired_properly": 51387868, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.87, 
            "with_itself": 51719769, 
            "with_itself_qc_failed": 0, 
            "singletons": 263040, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.5, 
            "diff_chroms": 37131, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 114964496, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 113057292, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.34, 
            "paired": 114964496, 
            "paired_qc_failed": 0, 
            "read1": 57482248, 
            "read1_qc_failed": 0, 
            "read2": 57482248, 
            "read2_qc_failed": 0, 
            "paired_properly": 110989369, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.54, 
            "with_itself": 112354296, 
            "with_itself_qc_failed": 0, 
            "singletons": 702996, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.61, 
            "diff_chroms": 166080, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 23314168, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 267865, 
            "paired_opt_dupes": 3940, 
            "dupes_pct": 0.011489
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 48236755, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 258071, 
            "paired_opt_dupes": 15943, 
            "dupes_pct": 0.00535
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 23181358, 
            "distinct_read_pairs": 22930406, 
            "one_read_pair": 22685946, 
            "two_read_pair": 238679, 
            "NRF": 0.989174, 
            "PBC1": 0.989339, 
            "PBC2": 95.047935
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 48217442, 
            "distinct_read_pairs": 47960279, 
            "one_read_pair": 47714915, 
            "two_read_pair": 240532, 
            "NRF": 0.994667, 
            "PBC1": 0.994884, 
            "PBC2": 198.37242
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 46092606, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 46092606, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 46092606, 
            "paired_qc_failed": 0, 
            "read1": 23046303, 
            "read1_qc_failed": 0, 
            "read2": 23046303, 
            "read2_qc_failed": 0, 
            "paired_properly": 46092606, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 46092606, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 95957368, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 95957368, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 95957368, 
            "paired_qc_failed": 0, 
            "read1": 47978684, 
            "read1_qc_failed": 0, 
            "read2": 47978684, 
            "read2_qc_failed": 0, 
            "paired_properly": 95957368, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 95957368, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 89758, 
        "Np": 0, 
        "N_opt": 89758, 
        "N_consv": 89758, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.200933488852815, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1834847, 
            "argmin_corr": 1500, 
            "min_corr": 0.1661552, 
            "NSC": 1.209312, 
            "RSC": 2.006887
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.329818059044
        }, 
        "rep1-pr1": {
            "FRiP": 0.338684714087
        }, 
        "rep1-pr2": {
            "FRiP": 0.338713889322
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.29895744105
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.210518366873, 
            "auc": 0.493817617567, 
            "ch_div": 0.138336538808, 
            "elbow_pt": 3.0650179215e-224, 
            "jsd": 0.718376763844, 
            "syn_auc": 0.495632973601, 
            "syn_elbow_pt": 0.263381329946, 
            "syn_jsd": 0.399940252403
        }
    ]
}