{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 126732858, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 122188990, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.41, 
            "paired": 126732858, 
            "paired_qc_failed": 0, 
            "read1": 63366429, 
            "read1_qc_failed": 0, 
            "read2": 63366429, 
            "read2_qc_failed": 0, 
            "paired_properly": 118076802, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.17, 
            "with_itself": 120825344, 
            "with_itself_qc_failed": 0, 
            "singletons": 1363646, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.08, 
            "diff_chroms": 247954, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 106653906, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 104801407, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.26, 
            "paired": 106653906, 
            "paired_qc_failed": 0, 
            "read1": 53326953, 
            "read1_qc_failed": 0, 
            "read2": 53326953, 
            "read2_qc_failed": 0, 
            "paired_properly": 102958254, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.53, 
            "with_itself": 104098130, 
            "with_itself_qc_failed": 0, 
            "singletons": 703277, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.66, 
            "diff_chroms": 170230, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 42346001, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 693664, 
            "paired_opt_dupes": 58730, 
            "dupes_pct": 0.016381
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 44220133, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 314126, 
            "paired_opt_dupes": 110501, 
            "dupes_pct": 0.007104
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 42330752, 
            "distinct_read_pairs": 41637741, 
            "one_read_pair": 41098203, 
            "two_read_pair": 506206, 
            "NRF": 0.983629, 
            "PBC1": 0.987042, 
            "PBC2": 81.188692
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44206086, 
            "distinct_read_pairs": 43892511, 
            "one_read_pair": 43597064, 
            "two_read_pair": 288605, 
            "NRF": 0.992907, 
            "PBC1": 0.993269, 
            "PBC2": 151.061361
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 83304674, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 83304674, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 83304674, 
            "paired_qc_failed": 0, 
            "read1": 41652337, 
            "read1_qc_failed": 0, 
            "read2": 41652337, 
            "read2_qc_failed": 0, 
            "paired_properly": 83304674, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 83304674, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 87812014, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 87812014, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 87812014, 
            "paired_qc_failed": 0, 
            "read1": 43906007, 
            "read1_qc_failed": 0, 
            "read2": 43906007, 
            "read2_qc_failed": 0, 
            "paired_properly": 87812014, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 87812014, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 254720, 
        "Np": 0, 
        "N_opt": 254720, 
        "N_consv": 254720, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.194776139461924, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2167703, 
            "argmin_corr": 1500, 
            "min_corr": 0.1799069, 
            "NSC": 1.08265, 
            "RSC": 0.4033607
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.441051509014
        }, 
        "rep1-pr1": {
            "FRiP": 0.407631806739
        }, 
        "rep1-pr2": {
            "FRiP": 0.407616551715
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.365694226783
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.191959046426, 
            "auc": 0.495391605268, 
            "ch_div": 0.135839641088, 
            "elbow_pt": 0.0, 
            "jsd": 0.710986888668, 
            "syn_auc": 0.49955866237, 
            "syn_elbow_pt": 0.212783848038, 
            "syn_jsd": 0.41719621378
        }
    ]
}
