/EXTERNAL Roadmap/K012809_1_lane_gembs/EXTERNAL-K012809_1969452
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1705115870 | 100.00 % | 852557935 | 100.00 % | 852557935 | 100.00 % |
| General Reads | 1572471957 | 92.22 % | 793274178 | 93.05 % | 779197779 | 91.40 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12138771 | 0.71 % | 6123861 | 0.72 % | 6014910 | 0.71 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 120505142 | 7.07 % | 53159896 | 6.24 % | 67345246 | 7.90 % |
| Bisulfite_reads C2T | 808054798 | 47.39 % | 407613872 | 47.81 % | 400440926 | 46.97 % |
| Bisulfite_reads G2A | 776555930 | 45.54 % | 391784167 | 45.95 % | 384771763 | 45.13 % |
| Concept | Value |
|---|---|
| Unique Fragments | 451815474 |
| Average Unique | 53.00 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 66755734243 | 38.76 % | 27490836199 | 31.93 % | 39264898044 | 45.60 % |
| Base Counts Overall C | 17477929507 | 10.15 % | 1147477235 | 1.33 % | 16330452272 | 18.97 % |
| Base Counts Overall G | 19391268754 | 11.26 % | 17537589495 | 20.37 % | 1853679259 | 2.15 % |
| Base Counts Overall T | 65996392136 | 38.32 % | 38617120428 | 44.85 % | 27379271708 | 31.80 % |
| Base Counts Overall N | 2595378230 | 1.51 % | 1315328078 | 1.53 % | 1280050152 | 1.49 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9838980220165263 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 547123658 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 852557935 |
| 100 | 852557935 |
| Insert Size Histogram |
|---|
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