/EXTERNAL Roadmap/K012814_1_lane_gembs/EXTERNAL-K012814_1969457
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1229892616 | 100.00 % | 614946308 | 100.00 % | 614946308 | 100.00 % |
| General Reads | 1146426838 | 93.21 % | 574991140 | 93.50 % | 571435698 | 92.92 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4495325 | 0.37 % | 2256533 | 0.37 % | 2238792 | 0.36 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 78970453 | 6.42 % | 37698635 | 6.13 % | 41271818 | 6.71 % |
| Bisulfite_reads C2T | 586451841 | 47.68 % | 294133711 | 47.83 % | 292318130 | 47.54 % |
| Bisulfite_reads G2A | 564470322 | 45.90 % | 283113962 | 46.04 % | 281356360 | 45.75 % |
| Concept | Value |
|---|---|
| Unique Fragments | 355028074 |
| Average Unique | 57.73 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 47502952602 | 38.24 % | 18426892102 | 29.67 % | 29076060500 | 46.81 % |
| Base Counts Overall C | 13532490934 | 10.89 % | 1182481585 | 1.90 % | 12350009349 | 19.88 % |
| Base Counts Overall G | 14865360350 | 11.97 % | 13061031130 | 21.03 % | 1804329220 | 2.91 % |
| Base Counts Overall T | 46846439274 | 37.71 % | 28686483104 | 46.19 % | 18159956170 | 29.24 % |
| Base Counts Overall N | 1471911056 | 1.18 % | 752689187 | 1.21 % | 719221869 | 1.16 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.980795892869705 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 427270451 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 614946308 |
| 100 | 614946308 |
| Insert Size Histogram |
|---|
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