{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 67164217, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26401981, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 39.31, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 80768275, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32350334, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 40.05, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 23081007, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 373534, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016184
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27776622, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 282149, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.010158
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 23077255, 
            "distinct_read_pairs": 22788902, 
            "one_read_pair": 22509346, 
            "two_read_pair": 273530, 
            "NRF": 0.987505, 
            "PBC1": 0.987733, 
            "PBC2": 82.292056
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27749641, 
            "distinct_read_pairs": 27516449, 
            "one_read_pair": 27314636, 
            "two_read_pair": 195663, 
            "NRF": 0.991597, 
            "PBC1": 0.992666, 
            "PBC2": 139.600415
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22707473, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22707473, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27494473, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27494473, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 95832, 
        "Np": 0, 
        "N_opt": 95832, 
        "N_consv": 95832, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 140, 
            "corr_est_frag_len": 0.187861556521187, 
            "phantom_peak": 70, 
            "corr_phantom_peak": 0.1930591, 
            "argmin_corr": 1500, 
            "min_corr": 0.1775988, 
            "NSC": 1.057786, 
            "RSC": 0.6638134
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.299622479392
        }, 
        "rep1-pr1": {
            "FRiP": 0.269456054635
        }, 
        "rep1-pr2": {
            "FRiP": 0.269906391728
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.236019156111
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.195464975852, 
            "auc": 0.491357612541, 
            "ch_div": 0.19806307405, 
            "elbow_pt": 4.53747727062e-114, 
            "jsd": 0.691709285169, 
            "syn_auc": 0.502321945444, 
            "syn_elbow_pt": 0.224023738649, 
            "syn_jsd": 0.376867626363
        }
    ]
}