{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 59151003, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37533335, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 63.45, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 74190938, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 68937005, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.92, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 32918462, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1096081, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.033297
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 59559553, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1504353, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.025258
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32895482, 
            "distinct_read_pairs": 31975585, 
            "one_read_pair": 31097031, 
            "two_read_pair": 851256, 
            "NRF": 0.972036, 
            "PBC1": 0.972524, 
            "PBC2": 36.530763
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 59538154, 
            "distinct_read_pairs": 58250507, 
            "one_read_pair": 57048968, 
            "two_read_pair": 1171152, 
            "NRF": 0.978373, 
            "PBC1": 0.979373, 
            "PBC2": 48.711839
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 31822381, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31822381, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 58055200, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 58055200, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 57295, 
        "Np": 0, 
        "N_opt": 57295, 
        "N_consv": 57295, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 135, 
            "corr_est_frag_len": 0.175607799813128, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1820329, 
            "argmin_corr": 1500, 
            "min_corr": 0.1682482, 
            "NSC": 1.043742, 
            "RSC": 0.5338929
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.132651283372
        }, 
        "rep1-pr1": {
            "FRiP": 0.124678223996
        }, 
        "rep1-pr2": {
            "FRiP": 0.125023287714
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0874745642832
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.278947807666, 
            "auc": 0.492737153483, 
            "ch_div": 0.118863922172, 
            "elbow_pt": 4.41921081912e-162, 
            "jsd": 0.600619380739, 
            "syn_auc": 0.504060659783, 
            "syn_elbow_pt": 0.141592635888, 
            "syn_jsd": 0.2678355482
        }
    ]
}