{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 54174379, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25400834, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 46.89, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 74190938, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 68937005, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.92, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 21843799, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 363012, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016619
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 59559553, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1504353, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.025258
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 21828161, 
            "distinct_read_pairs": 21531289, 
            "one_read_pair": 21249676, 
            "two_read_pair": 274723, 
            "NRF": 0.9864, 
            "PBC1": 0.986921, 
            "PBC2": 77.349461
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 59538154, 
            "distinct_read_pairs": 58250507, 
            "one_read_pair": 57048968, 
            "two_read_pair": 1171152, 
            "NRF": 0.978373, 
            "PBC1": 0.979373, 
            "PBC2": 48.711839
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21480787, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21480787, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 58055200, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 58055200, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 75100, 
        "Np": 0, 
        "N_opt": 75100, 
        "N_consv": 75100, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.178323321820135, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1877453, 
            "argmin_corr": 1500, 
            "min_corr": 0.173011, 
            "NSC": 1.030705, 
            "RSC": 0.3605393
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.187960064615
        }, 
        "rep1-pr1": {
            "FRiP": 0.175214235325
        }, 
        "rep1-pr2": {
            "FRiP": 0.174985265543
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.126644555899
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.243518194556, 
            "auc": 0.491148245348, 
            "ch_div": 0.155568928599, 
            "elbow_pt": 1.11788603003e-108, 
            "jsd": 0.632304164326, 
            "syn_auc": 0.513940869231, 
            "syn_elbow_pt": 0.184911333442, 
            "syn_jsd": 0.304039838141
        }
    ]
}