/EXTERNAL Roadmap/K012820_1_lane_gembs/EXTERNAL-K012820_1969463
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 2033647172 | 100.00 % | 1016823586 | 100.00 % | 1016823586 | 100.00 % |
| General Reads | 1908962632 | 93.87 % | 958174848 | 94.23 % | 950787784 | 93.51 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6190736 | 0.30 % | 3104505 | 0.31 % | 3086231 | 0.30 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 118493804 | 5.83 % | 55544233 | 5.46 % | 62949571 | 6.19 % |
| Bisulfite_reads C2T | 971815116 | 47.79 % | 487743707 | 47.97 % | 484071409 | 47.61 % |
| Bisulfite_reads G2A | 943338252 | 46.39 % | 473535646 | 46.57 % | 469802606 | 46.20 % |
| Concept | Value |
|---|---|
| Unique Fragments | 539104759 |
| Average Unique | 53.02 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 78936815310 | 38.43 % | 30850277874 | 30.04 % | 48086537436 | 46.82 % |
| Base Counts Overall C | 21586626176 | 10.51 % | 1784276348 | 1.74 % | 19802349828 | 19.28 % |
| Base Counts Overall G | 23987970929 | 11.68 % | 21195264899 | 20.64 % | 2792706030 | 2.72 % |
| Base Counts Overall T | 77408224410 | 37.69 % | 47085007899 | 45.85 % | 30323216511 | 29.53 % |
| Base Counts Overall N | 3478727547 | 1.69 % | 1784355166 | 1.74 % | 1694372381 | 1.65 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9794242920743939 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 658873931 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 1016823586 |
| 100 | 1016823586 |
| Insert Size Histogram |
|---|
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