/EXTERNAL Roadmap/K012817_1_lane_gembs/EXTERNAL-K012817_1969460
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1306429614 | 100.00 % | 653214807 | 100.00 % | 653214807 | 100.00 % |
| General Reads | 1228359308 | 94.02 % | 616546289 | 94.39 % | 611813019 | 93.66 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9507194 | 0.73 % | 4765587 | 0.73 % | 4741607 | 0.73 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 68563112 | 5.25 % | 31902931 | 4.88 % | 36660181 | 5.61 % |
| Bisulfite_reads C2T | 628995780 | 48.15 % | 315681604 | 48.33 % | 313314176 | 47.96 % |
| Bisulfite_reads G2A | 608870722 | 46.61 % | 305630272 | 46.79 % | 303240450 | 46.42 % |
| Concept | Value |
|---|---|
| Unique Fragments | 370952355 |
| Average Unique | 56.79 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 50797816133 | 38.50 % | 20778426284 | 31.49 % | 30019389849 | 45.50 % |
| Base Counts Overall C | 13902166332 | 10.54 % | 1051246618 | 1.59 % | 12850919714 | 19.48 % |
| Base Counts Overall G | 15094907509 | 11.44 % | 13570762498 | 20.57 % | 1524145011 | 2.31 % |
| Base Counts Overall T | 49951720394 | 37.86 % | 29472544635 | 44.67 % | 20479175759 | 31.04 % |
| Base Counts Overall N | 2202780646 | 1.67 % | 1101715472 | 1.67 % | 1101065174 | 1.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9854106533622681 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 450460124 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 653214807 |
| 100 | 653214807 |
| Insert Size Histogram |
|---|
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