/EXTERNAL Roadmap/K012797_1_lane_gembs/EXTERNAL-K012797_1969440
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 395404354 | 100.00 % | 197702177 | 100.00 % | 197702177 | 100.00 % |
| General Reads | 356779383 | 90.23 % | 180040162 | 91.07 % | 176739221 | 89.40 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8817133 | 2.23 % | 4462019 | 2.26 % | 4355114 | 2.20 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 29807838 | 7.54 % | 13199996 | 6.68 % | 16607842 | 8.40 % |
| Bisulfite_reads C2T | 185824568 | 47.00 % | 93765210 | 47.43 % | 92059358 | 46.56 % |
| Bisulfite_reads G2A | 179771948 | 45.47 % | 90736971 | 45.90 % | 89034977 | 45.03 % |
| Concept | Value |
|---|---|
| Unique Fragments | 110487414 |
| Average Unique | 55.89 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 15342725126 | 38.42 % | 5970797797 | 29.90 % | 9371927329 | 46.93 % |
| Base Counts Overall C | 4281222190 | 10.72 % | 374401855 | 1.88 % | 3906820335 | 19.57 % |
| Base Counts Overall G | 4799863202 | 12.02 % | 4208838696 | 21.08 % | 591024506 | 2.96 % |
| Base Counts Overall T | 14939359562 | 37.41 % | 9139079683 | 45.77 % | 5800279879 | 29.05 % |
| Base Counts Overall N | 572669674 | 1.43 % | 274801846 | 1.38 % | 297867828 | 1.49 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9827360608158855 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 132265531 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 197702177 |
| 100 | 197702177 |
| Insert Size Histogram |
|---|
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