{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 25500897, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 19143860, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 75.07, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 32771962, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24483543, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 74.71, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 16960080, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 204207, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.01204
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 21222150, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 274814, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.012949
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 16959610, 
            "distinct_read_pairs": 16795178, 
            "one_read_pair": 16638911, 
            "two_read_pair": 153006, 
            "NRF": 0.990304, 
            "PBC1": 0.990696, 
            "PBC2": 108.746788
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 21219213, 
            "distinct_read_pairs": 21028763, 
            "one_read_pair": 20847612, 
            "two_read_pair": 177288, 
            "NRF": 0.991025, 
            "PBC1": 0.991386, 
            "PBC2": 117.591783
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 16755873, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16755873, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 20947336, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20947336, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 30801, 
        "Np": 0, 
        "N_opt": 30801, 
        "N_consv": 30801, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.181789754875684, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1897129, 
            "argmin_corr": 1500, 
            "min_corr": 0.1759178, 
            "NSC": 1.033379, 
            "RSC": 0.425654
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.134734564255
        }, 
        "rep1-pr1": {
            "FRiP": 0.122272015752
        }, 
        "rep1-pr2": {
            "FRiP": 0.122564353842
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.078736236312
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.216326237653, 
            "auc": 0.489994592696, 
            "ch_div": 0.216742573584, 
            "elbow_pt": 8.18021534501e-85, 
            "jsd": 0.633733460756, 
            "syn_auc": 0.492950528347, 
            "syn_elbow_pt": 0.107542046661, 
            "syn_jsd": 0.319495743307
        }
    ]
}
