{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 31906717, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24305514, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 76.18, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 24627158, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21830824, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 20586926, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 129261, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.006279
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 18482684, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 146375, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.00792
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 20586762, 
            "distinct_read_pairs": 20486858, 
            "one_read_pair": 20408798, 
            "two_read_pair": 74517, 
            "NRF": 0.995147, 
            "PBC1": 0.99619, 
            "PBC2": 273.881101
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 18482205, 
            "distinct_read_pairs": 18365034, 
            "one_read_pair": 18264475, 
            "two_read_pair": 96852, 
            "NRF": 0.99366, 
            "PBC1": 0.994524, 
            "PBC2": 188.581289
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 20457665, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20457665, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 18336309, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18336309, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 8674, 
        "Np": 0, 
        "N_opt": 8674, 
        "N_consv": 8674, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 230, 
            "corr_est_frag_len": 0.177630508898484, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1893872, 
            "argmin_corr": 1500, 
            "min_corr": 0.1735431, 
            "NSC": 1.023553, 
            "RSC": 0.2579771
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0280638871776
        }, 
        "rep1-pr1": {
            "FRiP": 0.0339483285887
        }, 
        "rep1-pr2": {
            "FRiP": 0.033388341684
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0118854692956
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.281654805888, 
            "auc": 0.490879841762, 
            "ch_div": 0.142654356284, 
            "elbow_pt": 2.62581424408e-102, 
            "jsd": 0.568516156378, 
            "syn_auc": 0.507379574397, 
            "syn_elbow_pt": 0.0377983934279, 
            "syn_jsd": 0.239915841777
        }
    ]
}