{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 24937514, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18512361, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 74.23, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 24627158, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21830824, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 15671045, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 86082, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.005493
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 18482684, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 146375, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.00792
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 15670913, 
            "distinct_read_pairs": 15605198, 
            "one_read_pair": 15554313, 
            "two_read_pair": 47905, 
            "NRF": 0.995807, 
            "PBC1": 0.996739, 
            "PBC2": 324.690805
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 18482205, 
            "distinct_read_pairs": 18365034, 
            "one_read_pair": 18264475, 
            "two_read_pair": 96852, 
            "NRF": 0.99366, 
            "PBC1": 0.994524, 
            "PBC2": 188.581289
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 15584963, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 15584963, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 18336309, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18336309, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 11436, 
        "Np": 0, 
        "N_opt": 11436, 
        "N_consv": 11436, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 240, 
            "corr_est_frag_len": 0.178213801840568, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.191882, 
            "argmin_corr": 1500, 
            "min_corr": 0.1732889, 
            "NSC": 1.02842, 
            "RSC": 0.264878
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0406046751485
        }, 
        "rep1-pr1": {
            "FRiP": 0.0485292366321
        }, 
        "rep1-pr2": {
            "FRiP": 0.048311851974
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.012927313745
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.27241406487, 
            "auc": 0.489540366363, 
            "ch_div": 0.168511358047, 
            "elbow_pt": 1.6433017099e-77, 
            "jsd": 0.562880117719, 
            "syn_auc": 0.51934892716, 
            "syn_elbow_pt": 0.0491763213068, 
            "syn_jsd": 0.236956781048
        }
    ]
}
