/EXTERNAL Roadmap/K012799_1_lane_gembs/EXTERNAL-K012799_1969442
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1765633114 | 100.00 % | 882816557 | 100.00 % | 882816557 | 100.00 % |
| General Reads | 1615410533 | 91.49 % | 814549741 | 92.27 % | 800860792 | 90.72 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 24464500 | 1.39 % | 12353416 | 1.40 % | 12111084 | 1.37 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 125758081 | 7.12 % | 55913400 | 6.33 % | 69844681 | 7.91 % |
| Bisulfite_reads C2T | 835885580 | 47.34 % | 421436497 | 47.74 % | 414449083 | 46.95 % |
| Bisulfite_reads G2A | 803989453 | 45.54 % | 405466660 | 45.93 % | 398522793 | 45.14 % |
| Concept | Value |
|---|---|
| Unique Fragments | 497653120 |
| Average Unique | 56.37 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 68261642039 | 38.28 % | 26988826221 | 30.27 % | 41272815818 | 46.29 % |
| Base Counts Overall C | 18909780217 | 10.60 % | 1561583501 | 1.75 % | 17348196716 | 19.46 % |
| Base Counts Overall G | 21095332054 | 11.83 % | 18671243394 | 20.94 % | 2424088660 | 2.72 % |
| Base Counts Overall T | 67127717838 | 37.64 % | 40517733274 | 45.44 % | 26609984564 | 29.84 % |
| Base Counts Overall N | 2934472366 | 1.65 % | 1425085867 | 1.60 % | 1509386499 | 1.69 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9812602381801452 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 599095847 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 882816557 |
| 100 | 882816557 |
| Insert Size Histogram |
|---|
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