/EXTERNAL Roadmap/K012815_1_lane_gembs/EXTERNAL-K012815_1969458
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1343750646 | 100.00 % | 671875323 | 100.00 % | 671875323 | 100.00 % |
| General Reads | 1258473446 | 93.65 % | 631581316 | 94.00 % | 626892130 | 93.30 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3105850 | 0.23 % | 1555148 | 0.23 % | 1550702 | 0.23 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 82171350 | 6.12 % | 38738859 | 5.77 % | 43432491 | 6.46 % |
| Bisulfite_reads C2T | 640872265 | 47.69 % | 321653937 | 47.87 % | 319218328 | 47.51 % |
| Bisulfite_reads G2A | 620707031 | 46.19 % | 311482527 | 46.36 % | 309224504 | 46.02 % |
| Concept | Value |
|---|---|
| Unique Fragments | 328974304 |
| Average Unique | 48.96 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 52369037295 | 38.59 % | 20644539053 | 30.42 % | 31724498242 | 46.75 % |
| Base Counts Overall C | 14140029062 | 10.42 % | 1304567402 | 1.92 % | 12835461660 | 18.91 % |
| Base Counts Overall G | 16052781943 | 11.83 % | 13963334858 | 20.58 % | 2089447085 | 3.08 % |
| Base Counts Overall T | 50756168468 | 37.40 % | 30731753032 | 45.29 % | 20024415436 | 29.51 % |
| Base Counts Overall N | 2400798478 | 1.77 % | 1215213278 | 1.79 % | 1185585200 | 1.75 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9802081914498217 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 411382435 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 671875323 |
| 100 | 671875323 |
| Insert Size Histogram |
|---|
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