/CEMT/A34002_3_lane_gembs/C2RT2ACXX_1_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 350206366 | 100.00 % | 175103183 | 100.00 % | 175103183 | 100.00 % |
| General Reads | 346367569 | 98.90 % | 173690976 | 99.19 % | 172676593 | 98.61 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 214811 | 0.06 % | 107600 | 0.06 % | 107211 | 0.06 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3623986 | 1.03 % | 1304607 | 0.75 % | 2319379 | 1.32 % |
| Bisulfite_reads C2T | 177669831 | 50.73 % | 89080162 | 50.87 % | 88589669 | 50.59 % |
| Bisulfite_reads G2A | 168912549 | 48.23 % | 84718414 | 48.38 % | 84194135 | 48.08 % |
| Concept | Value |
|---|---|
| Unique Fragments | 145393387 |
| Average Unique | 83.03 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 13954649388 | 39.45 % | 5543137394 | 31.34 % | 8411511994 | 47.56 % |
| Base Counts Overall C | 3588550941 | 10.15 % | 115773875 | 0.65 % | 3472777066 | 19.64 % |
| Base Counts Overall G | 3649365035 | 10.32 % | 3534050760 | 19.98 % | 115314275 | 0.65 % |
| Base Counts Overall T | 13815385245 | 39.06 % | 8312916276 | 47.00 % | 5502468969 | 31.11 % |
| Base Counts Overall N | 362892357 | 1.03 % | 179543178 | 1.02 % | 183349179 | 1.04 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9959686718804347 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 166274651 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 175103183 |
| 100 | 175103183 |
| Insert Size Histogram |
|---|
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