/EXTERNAL BLUEPRINT/K006265_7_lane_gembs/C00184.Bisulfite-Seq.DNA_Methylation.EGAX00001097771_7
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 2127261060 | 100.00 % | 1063630530 | 100.00 % | 1063630530 | 100.00 % |
| General Reads | 2061008109 | 96.89 % | 1033539018 | 97.17 % | 1027469091 | 96.60 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 23038849 | 1.08 % | 11540548 | 1.09 % | 11498301 | 1.08 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 43214102 | 2.03 % | 18550964 | 1.74 % | 24663138 | 2.32 % |
| Bisulfite_reads C2T | 1100422277 | 51.73 % | 551894781 | 51.89 % | 548527496 | 51.57 % |
| Bisulfite_reads G2A | 983624681 | 46.24 % | 493184785 | 46.37 % | 490439896 | 46.11 % |
| Concept | Value |
|---|---|
| Unique Fragments | 821863766 |
| Average Unique | 77.27 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 75818804257 | 35.28 % | 30206251788 | 28.11 % | 45612552469 | 42.45 % |
| Base Counts Overall C | 30395959674 | 14.14 % | 1596090682 | 1.49 % | 28799868992 | 26.80 % |
| Base Counts Overall G | 30836366608 | 14.35 % | 29259027331 | 27.23 % | 1577339277 | 1.47 % |
| Base Counts Overall T | 75617707452 | 35.18 % | 45294482737 | 42.15 % | 30323224715 | 28.22 % |
| Base Counts Overall N | 2247120087 | 1.05 % | 1102126501 | 1.03 % | 1144993586 | 1.07 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9984403806323567 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 1007760112 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 31295509 |
| 100 | 1032335021 |
| 101 | 31295509 |
| 100 | 1032335021 |
| Insert Size Histogram |
|---|
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