/EXTERNAL BLUEPRINT/K006302_18_lane_gembs/pz_290.Bisulfite-Seq.DNA_Methylation.EGAX00001205548
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1331790628 | 100.00 % | 665895314 | 100.00 % | 665895314 | 100.00 % |
| General Reads | 1067111271 | 80.13 % | 512165731 | 76.91 % | 554945540 | 83.34 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 37753954 | 2.83 % | 18890265 | 2.84 % | 18863689 | 2.83 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 226925403 | 17.04 % | 134839318 | 20.25 % | 92086085 | 13.83 % |
| Bisulfite_reads C2T | 574600875 | 43.14 % | 277262278 | 41.64 % | 297338597 | 44.65 % |
| Bisulfite_reads G2A | 530264350 | 39.82 % | 253793718 | 38.11 % | 276470632 | 41.52 % |
| Concept | Value |
|---|---|
| Unique Fragments | 419878523 |
| Average Unique | 63.05 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 48892827887 | 35.99 % | 20273062366 | 29.85 % | 28619765521 | 42.14 % |
| Base Counts Overall C | 19447978633 | 14.32 % | 3706653815 | 5.46 % | 15741324818 | 23.18 % |
| Base Counts Overall G | 22064028149 | 16.24 % | 16636445359 | 24.49 % | 5427582790 | 7.99 % |
| Base Counts Overall T | 44060393572 | 32.43 % | 26615372808 | 39.19 % | 17445020764 | 25.68 % |
| Base Counts Overall N | 1377415815 | 1.01 % | 689787680 | 1.02 % | 687628135 | 1.01 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9988209032081685 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 508941500 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 665895314 |
| 101 | 665895314 |
| Insert Size Histogram |
|---|
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