/EXTERNAL BLUEPRINT/K010540_1_lane_gembs/EXTERNAL-K010540_1798782_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 256907910 | 100.00 % | 128453955 | 100.00 % | 128453955 | 100.00 % |
| General Reads | 248252134 | 96.63 % | 124340536 | 96.80 % | 123911598 | 96.46 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2590489 | 1.01 % | 1297630 | 1.01 % | 1292859 | 1.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6065287 | 2.36 % | 2815789 | 2.19 % | 3249498 | 2.53 % |
| Bisulfite_reads C2T | 132176875 | 51.45 % | 66213698 | 51.55 % | 65963177 | 51.35 % |
| Bisulfite_reads G2A | 118665748 | 46.19 % | 59424468 | 46.26 % | 59241280 | 46.12 % |
| Concept | Value |
|---|---|
| Unique Fragments | 100612950 |
| Average Unique | 78.33 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 9431385770 | 35.99 % | 3708375386 | 28.30 % | 5723010384 | 43.68 % |
| Base Counts Overall C | 3570931666 | 13.63 % | 184002999 | 1.40 % | 3386928667 | 25.85 % |
| Base Counts Overall G | 3621760550 | 13.82 % | 3439214581 | 26.25 % | 182545969 | 1.39 % |
| Base Counts Overall T | 9314415261 | 35.54 % | 5641059967 | 43.05 % | 3673355294 | 28.04 % |
| Base Counts Overall N | 266113573 | 1.02 % | 129650477 | 0.99 % | 136463096 | 1.04 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9992708451244361 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 121685707 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 128453955 |
| 101 | 128453955 |
| Insert Size Histogram |
|---|
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