/cemt/A36005_3_lane_gembs/C415FANXX_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 381376106 | 100.00 % | 190688053 | 100.00 % | 190688053 | 100.00 % |
| General Reads | 371175565 | 97.33 % | 186848386 | 97.99 % | 184327179 | 96.66 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 30992 | 0.01 % | 15570 | 0.01 % | 15422 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10169549 | 2.67 % | 3824097 | 2.01 % | 6345452 | 3.33 % |
| Bisulfite_reads C2T | 189080243 | 49.58 % | 95167846 | 49.91 % | 93912397 | 49.25 % |
| Bisulfite_reads G2A | 182126314 | 47.76 % | 91696110 | 48.09 % | 90430204 | 47.42 % |
| Concept | Value |
|---|---|
| Unique Fragments | 134482189 |
| Average Unique | 70.52 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 18680251257 | 38.87 % | 8389591895 | 34.92 % | 10290659362 | 42.83 % |
| Base Counts Overall C | 4879420949 | 10.15 % | 307861107 | 1.28 % | 4571559842 | 19.03 % |
| Base Counts Overall G | 4929188483 | 10.26 % | 4670610056 | 19.44 % | 258578427 | 1.08 % |
| Base Counts Overall T | 18737451600 | 38.99 % | 10466897485 | 43.56 % | 8270554115 | 34.42 % |
| Base Counts Overall N | 827077067 | 1.72 % | 191734135 | 0.80 % | 635342932 | 2.64 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9906830910450503 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 155733652 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 190688053 |
| 125 | 190688053 |
| Insert Size Histogram |
|---|
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