/cemt/A36005_3_lane_gembs/C6HN2ANXX_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 483482154 | 100.00 % | 241741077 | 100.00 % | 241741077 | 100.00 % |
| General Reads | 477024947 | 98.66 % | 239139671 | 98.92 % | 237885276 | 98.40 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 37339 | 0.01 % | 18711 | 0.01 % | 18628 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6419868 | 1.33 % | 2582695 | 1.07 % | 3837173 | 1.59 % |
| Bisulfite_reads C2T | 242769902 | 50.21 % | 121691319 | 50.34 % | 121078583 | 50.09 % |
| Bisulfite_reads G2A | 234292384 | 48.46 % | 117467063 | 48.59 % | 116825321 | 48.33 % |
| Concept | Value |
|---|---|
| Unique Fragments | 180601249 |
| Average Unique | 74.71 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24110597363 | 39.58 % | 10677417043 | 35.05 % | 13433180320 | 44.10 % |
| Base Counts Overall C | 6129566575 | 10.06 % | 262929567 | 0.86 % | 5866637008 | 19.26 % |
| Base Counts Overall G | 6265324445 | 10.28 % | 5931818904 | 19.47 % | 333505541 | 1.09 % |
| Base Counts Overall T | 23926392991 | 39.28 % | 13345263119 | 43.81 % | 10581129872 | 34.74 % |
| Base Counts Overall N | 486870030 | 0.80 % | 241947069 | 0.79 % | 244922961 | 0.80 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9939936415877981 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 205145329 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 241741077 |
| 125 | 241741077 |
| Insert Size Histogram |
|---|
 |