/cemt/A36005_3_lane_gembs/C6HN2ANXX_4_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 506927514 | 100.00 % | 253463757 | 100.00 % | 253463757 | 100.00 % |
| General Reads | 500006026 | 98.63 % | 250712012 | 98.91 % | 249294014 | 98.35 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 40257 | 0.01 % | 20182 | 0.01 % | 20075 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6881231 | 1.36 % | 2731563 | 1.08 % | 4149668 | 1.64 % |
| Bisulfite_reads C2T | 254443533 | 50.19 % | 127566947 | 50.33 % | 126876586 | 50.06 % |
| Bisulfite_reads G2A | 245602750 | 48.45 % | 123165247 | 48.59 % | 122437503 | 48.31 % |
| Concept | Value |
|---|---|
| Unique Fragments | 189353595 |
| Average Unique | 74.71 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 25279221786 | 39.58 % | 11202557421 | 35.08 % | 14076664365 | 44.08 % |
| Base Counts Overall C | 6426572663 | 10.06 % | 276308953 | 0.87 % | 6150263710 | 19.26 % |
| Base Counts Overall G | 6567015547 | 10.28 % | 6217789972 | 19.47 % | 349225575 | 1.09 % |
| Base Counts Overall T | 25089286781 | 39.28 % | 13986131535 | 43.79 % | 11103155246 | 34.77 % |
| Base Counts Overall N | 510769987 | 0.80 % | 253645501 | 0.79 % | 257124486 | 0.81 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9939766291417091 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 215056073 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 253463757 |
| 125 | 253463757 |
| Insert Size Histogram |
|---|
 |