/cemt/A36017_3_lane_gembs

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SAMPLE A36017_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1338739192 100.00 % 669369596 100.00 % 669369596 100.00 %
General Reads 1307461058 97.66 % 656690836 98.11 % 650770222 97.22 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 154903 0.01 % 77789 0.01 % 77114 0.01 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 31123231 2.32 % 12600971 1.88 % 18522260 2.77 %
Bisulfite_reads C2T 672965345 50.27 % 338038929 50.50 % 334926416 50.04 %
Bisulfite_reads G2A 634650616 47.41 % 318729696 47.62 % 315920920 47.20 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 517947856
Average Unique 77.38 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 66806239774 39.61 % 30046513343 35.63 % 36759726431 43.58 %
Base Counts Overall C 16570027398 9.82 % 744357649 0.88 % 15825669749 18.76 %
Base Counts Overall G 16875077320 10.00 % 16085163951 19.07 % 789913369 0.94 %
Base Counts Overall T 66614819414 39.49 % 36791570550 43.62 % 29823248864 35.36 %
Base Counts Overall N 1814974286 1.08 % 672963603 0.80 % 1142010683 1.35 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.995194934606295
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 593852350



Mapping Quality

Mapping Quality Histogram
A36017_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A36017_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C5L1JANXX_5_1
C5L1JANXX_6_1
C419NANXX_8_1