/cemt/A36017_3_lane_gembs/C5L1JANXX_5_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 428069246 | 100.00 % | 214034623 | 100.00 % | 214034623 | 100.00 % |
| General Reads | 418938466 | 97.87 % | 210102006 | 98.16 % | 208836460 | 97.57 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 48470 | 0.01 % | 24305 | 0.01 % | 24165 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9082310 | 2.12 % | 3908312 | 1.83 % | 5173998 | 2.42 % |
| Bisulfite_reads C2T | 215648788 | 50.38 % | 108166033 | 50.54 % | 107482755 | 50.22 % |
| Bisulfite_reads G2A | 203338148 | 47.50 % | 101960278 | 47.64 % | 101377870 | 47.37 % |
| Concept | Value |
|---|---|
| Unique Fragments | 166764385 |
| Average Unique | 77.91 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 21439928528 | 39.75 % | 9639135726 | 35.74 % | 11800792802 | 43.76 % |
| Base Counts Overall C | 5321808382 | 9.87 % | 234071282 | 0.87 % | 5087737100 | 18.87 % |
| Base Counts Overall G | 5393463823 | 10.00 % | 5137595427 | 19.05 % | 255868396 | 0.95 % |
| Base Counts Overall T | 21339229897 | 39.56 % | 11742147869 | 43.54 % | 9597082028 | 35.59 % |
| Base Counts Overall N | 442294366 | 0.82 % | 215412194 | 0.80 % | 226882172 | 0.84 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9953020885932898 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 190735762 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 214034623 |
| 125 | 214034623 |
| Insert Size Histogram |
|---|
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