/cemt/A36017_3_lane_gembs/C5L1JANXX_6_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 430735722 | 100.00 % | 215367861 | 100.00 % | 215367861 | 100.00 % |
| General Reads | 421468834 | 97.85 % | 211379791 | 98.15 % | 210089043 | 97.55 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 48638 | 0.01 % | 24401 | 0.01 % | 24237 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9218250 | 2.14 % | 3963669 | 1.84 % | 5254581 | 2.44 % |
| Bisulfite_reads C2T | 216971150 | 50.37 % | 108833962 | 50.53 % | 108137188 | 50.21 % |
| Bisulfite_reads G2A | 204546322 | 47.49 % | 102570230 | 47.63 % | 101976092 | 47.35 % |
| Concept | Value |
|---|---|
| Unique Fragments | 167717506 |
| Average Unique | 77.87 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 21572120755 | 39.75 % | 9698603155 | 35.74 % | 11873517600 | 43.76 % |
| Base Counts Overall C | 5352829801 | 9.86 % | 236943541 | 0.87 % | 5115886260 | 18.85 % |
| Base Counts Overall G | 5428305601 | 10.00 % | 5169651965 | 19.05 % | 258653636 | 0.95 % |
| Base Counts Overall T | 21472215183 | 39.56 % | 11814283403 | 43.54 % | 9657931780 | 35.59 % |
| Base Counts Overall N | 447229632 | 0.82 % | 216868422 | 0.80 % | 230361210 | 0.85 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9951858245342972 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 191814527 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 215367861 |
| 125 | 215367861 |
| Insert Size Histogram |
|---|
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