/cemt/A36315_3_lane_gembs

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SAMPLE A36315_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 895910540 100.00 % 447955270 100.00 % 447955270 100.00 %
General Reads 876093782 97.79 % 439076720 98.02 % 437017062 97.56 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 21474 0.00 % 10746 0.00 % 10728 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 19795284 2.21 % 8867804 1.98 % 10927480 2.44 %
Bisulfite_reads C2T 451488124 50.39 % 226277193 50.51 % 225210931 50.28 %
Bisulfite_reads G2A 424627132 47.40 % 212810273 47.51 % 211816859 47.29 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 335138908
Average Unique 74.82 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 44694966317 39.59 % 21046342298 37.29 % 23648624019 41.90 %
Base Counts Overall C 11313388222 10.02 % 460529469 0.82 % 10852858753 19.23 %
Base Counts Overall G 11447692158 10.14 % 10941111779 19.38 % 506580379 0.90 %
Base Counts Overall T 44487723688 39.41 % 23541838328 41.71 % 20945885360 37.11 %
Base Counts Overall N 940957655 0.83 % 452542146 0.80 % 488415509 0.87 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9890293462108654
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 390677405



Mapping Quality

Mapping Quality Histogram
A36315_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A36315_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C46BBANXX_7_1
C6A1FANXX_1_1
C6HP3ANXX_1_1