/cemt/A36004_3_lane_gembs/C6HN2ANXX_2_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 489800530 | 100.00 % | 244900265 | 100.00 % | 244900265 | 100.00 % |
| General Reads | 481986234 | 98.40 % | 241531827 | 98.62 % | 240454407 | 98.18 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 19880 | 0.00 % | 9944 | 0.00 % | 9936 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7794416 | 1.59 % | 3358494 | 1.37 % | 4435922 | 1.81 % |
| Bisulfite_reads C2T | 247395112 | 50.51 % | 123975609 | 50.62 % | 123419503 | 50.40 % |
| Bisulfite_reads G2A | 234611002 | 47.90 % | 117566162 | 48.01 % | 117044840 | 47.79 % |
| Concept | Value |
|---|---|
| Unique Fragments | 197682534 |
| Average Unique | 80.72 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24522800335 | 39.74 % | 11383269870 | 36.89 % | 13139530465 | 42.58 % |
| Base Counts Overall C | 6154163587 | 9.97 % | 239307998 | 0.78 % | 5914855589 | 19.17 % |
| Base Counts Overall G | 6165660055 | 9.99 % | 5917332236 | 19.18 % | 248327819 | 0.80 % |
| Base Counts Overall T | 24380082405 | 39.50 % | 13072464921 | 42.36 % | 11307617484 | 36.64 % |
| Base Counts Overall N | 492160398 | 0.80 % | 245058365 | 0.79 % | 247102033 | 0.80 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9948534073076458 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 225581093 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 244900265 |
| 125 | 244900265 |
| Insert Size Histogram |
|---|
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