/cemt/A36000_3_lane_gembs

BACK

SAMPLE A36000_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1538518702 100.00 % 769259351 100.00 % 769259351 100.00 %
General Reads 1510121992 98.15 % 759241573 98.70 % 750880419 97.61 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 232780 0.02 % 117069 0.02 % 115711 0.02 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 28163930 1.83 % 9900709 1.29 % 18263221 2.37 %
Bisulfite_reads C2T 768479988 49.95 % 386304556 50.22 % 382175432 49.68 %
Bisulfite_reads G2A 741874784 48.22 % 373054086 48.50 % 368820698 47.94 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 576761634
Average Unique 74.98 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 76656105418 39.54 % 31859783646 32.87 % 44796321772 46.22 %
Base Counts Overall C 19337399587 9.98 % 815577764 0.84 % 18521821823 19.11 %
Base Counts Overall G 19829290707 10.23 % 18785269776 19.38 % 1044020931 1.08 %
Base Counts Overall T 76286230483 39.35 % 44695159837 46.11 % 31591070646 32.59 %
Base Counts Overall N 1744330257 0.90 % 770887203 0.80 % 973443054 1.00 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9944416277939302
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 651277982



Mapping Quality

Mapping Quality Histogram
A36000_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A36000_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C418TANXX_2_1
C46BBANXX_1_1
C418TANXX_1_1