/EXTERNAL BLUEPRINT/K006384_K006397_20_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1966080248 | 100.00 % | 983040124 | 100.00 % | 983040124 | 100.00 % |
| General Reads | 1864443229 | 94.83 % | 935294256 | 95.14 % | 929148973 | 94.52 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 43963495 | 2.24 % | 22030186 | 2.24 % | 21933309 | 2.23 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 57673524 | 2.93 % | 25715682 | 2.62 % | 31957842 | 3.25 % |
| Bisulfite_reads C2T | 994946538 | 50.61 % | 499233383 | 50.78 % | 495713155 | 50.43 % |
| Bisulfite_reads G2A | 913460186 | 46.46 % | 458091059 | 46.60 % | 455369127 | 46.32 % |
| Concept | Value |
|---|---|
| Unique Fragments | 751462862 |
| Average Unique | 76.44 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 72283017190 | 36.04 % | 29177205228 | 29.10 % | 43105811962 | 42.99 % |
| Base Counts Overall C | 27144261223 | 13.54 % | 1578076575 | 1.57 % | 25566184648 | 25.50 % |
| Base Counts Overall G | 27342608015 | 13.63 % | 25806375018 | 25.74 % | 1536232997 | 1.53 % |
| Base Counts Overall T | 71699875569 | 35.75 % | 42693553733 | 42.58 % | 29006321836 | 28.93 % |
| Base Counts Overall N | 2070423299 | 1.03 % | 1014882094 | 1.01 % | 1055541205 | 1.05 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9989639725873781 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 913781595 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
 |
| LANE REPORTS |
|---|
| UMCG00015.Bisulfite-Seq.DNA_Methylation.EGAX00001345055_11 |
| UMCG00015.Bisulfite-Seq.DNA_Methylation.EGAX00001345069_9 |