/EXTERNAL BLUEPRINT/K006384_K006397_20_lane_gembs/UMCG00015.Bisulfite-Seq.DNA_Methylation.EGAX00001345055_11
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1126983218 | 100.00 % | 563491609 | 100.00 % | 563491609 | 100.00 % |
| General Reads | 1045017666 | 92.73 % | 523852504 | 92.97 % | 521165162 | 92.49 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 38486155 | 3.41 % | 19282503 | 3.42 % | 19203652 | 3.41 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 43479397 | 3.86 % | 20356602 | 3.61 % | 23122795 | 4.10 % |
| Bisulfite_reads C2T | 573225859 | 50.86 % | 287501938 | 51.02 % | 285723921 | 50.71 % |
| Bisulfite_reads G2A | 510277962 | 45.28 % | 255633069 | 45.37 % | 254644893 | 45.19 % |
| Concept | Value |
|---|---|
| Unique Fragments | 401910449 |
| Average Unique | 71.33 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 39137720924 | 34.05 % | 16465076673 | 28.65 % | 22672644251 | 39.45 % |
| Base Counts Overall C | 17867430595 | 15.54 % | 1166680801 | 2.03 % | 16700749794 | 29.06 % |
| Base Counts Overall G | 17986529910 | 15.65 % | 16841172736 | 29.30 % | 1145357174 | 1.99 % |
| Base Counts Overall T | 38772230545 | 33.73 % | 22427380614 | 39.02 % | 16344849931 | 28.44 % |
| Base Counts Overall N | 1188376262 | 1.03 % | 575833294 | 1.00 % | 612542968 | 1.07 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9989740875085293 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 512964232 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 563491609 |
| 101 | 563491609 |
| Insert Size Histogram |
|---|
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