/EXTERNAL BLUEPRINT/K010506_1_lane_gembs/EXTERNAL-K010506_1798748_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 687076694 | 100.00 % | 343538347 | 100.00 % | 343538347 | 100.00 % |
| General Reads | 669980265 | 97.51 % | 336351754 | 97.91 % | 333628511 | 97.12 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3245240 | 0.47 % | 1627052 | 0.47 % | 1618188 | 0.47 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 13851189 | 2.02 % | 5559541 | 1.62 % | 8291648 | 2.41 % |
| Bisulfite_reads C2T | 345386705 | 50.27 % | 173386147 | 50.47 % | 172000558 | 50.07 % |
| Bisulfite_reads G2A | 327838800 | 47.72 % | 164592659 | 47.91 % | 163246141 | 47.52 % |
| Concept | Value |
|---|---|
| Unique Fragments | 281212424 |
| Average Unique | 81.86 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 27075807054 | 38.63 % | 10423390622 | 29.75 % | 16652416432 | 47.52 % |
| Base Counts Overall C | 7559043207 | 10.79 % | 362202287 | 1.03 % | 7196840920 | 20.54 % |
| Base Counts Overall G | 7640111732 | 10.90 % | 7296041981 | 20.82 % | 344069751 | 0.98 % |
| Base Counts Overall T | 27087645082 | 38.65 % | 16611895681 | 47.41 % | 10475749401 | 29.90 % |
| Base Counts Overall N | 719215713 | 1.03 % | 347380823 | 0.99 % | 371834890 | 1.06 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9991714153609008 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 325069443 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 343538347 |
| 101 | 343538347 |
| Insert Size Histogram |
|---|
 |