/EXTERNAL BLUEPRINT/methylation/K006276_K006280_11_lane_gembs
BACK
SAMPLE K006276_K006280_11_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
26815148 |
21163619 |
78.92 % |
| NonRefCpG |
317941 |
157155 |
49.43 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
6907360 |
13.94 % |
5477609 |
12.77 % |
110248 |
19.62 % |
36862 |
10.19 % |
| Intermediate (0.3-0.7) |
9770686 |
19.73 % |
7162117 |
16.70 % |
141081 |
25.11 % |
74496 |
20.59 % |
| Methylated (0.7-1) |
32856337 |
66.33 % |
30249850 |
70.53 % |
310582 |
55.27 % |
250515 |
69.23 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.830 |
|
0.850 |
|
0.750 |
|
0.830 |
|