/EXTERNAL Roadmap/K006486_1_lane_gembs/SRX175354_14_lanes

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SAMPLE K006486_1_lane_gembs LANE SRX175354_14_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 3101723125 100.00 % 3101723125 100.00 % 0 0.00 %
General Reads 2913316398 93.93 % 2913316398 93.93 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 8269655 0.27 % 8269655 0.27 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 180137072 5.81 % 180137072 5.81 % 0 0.00 %
Bisulfite_reads C2T 1480842759 47.74 % 1480842759 47.74 % 0 0.00 %
Bisulfite_reads G2A 1440743294 46.45 % 1440743294 46.45 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 2448089140
Average Unique 83.79 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 94319083468 30.07 %
Base Counts Overall C 2967321635 0.95 %
Base Counts Overall G 67912806037 21.65 %
Base Counts Overall T 140896579640 44.91 %
Base Counts Overall N 7601607087 2.42 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9946390329215613
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX175354_14_lanes.mapq.png



Read Length

Read Length Reads
101 423362242
100 2678360883