/EXTERNAL Roadmap/K006487_K006488_2_lane_gembs/SRX116603_8_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1718598738 | 100.00 % | 859299369 | 100.00 % | 859299369 | 100.00 % |
| General Reads | 1648953406 | 95.95 % | 825110188 | 96.02 % | 823843218 | 95.87 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9980473 | 0.58 % | 4995404 | 0.58 % | 4985069 | 0.58 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 59664859 | 3.47 % | 29193777 | 3.40 % | 30471082 | 3.55 % |
| Bisulfite_reads C2T | 893331484 | 51.98 % | 447103400 | 52.03 % | 446228084 | 51.93 % |
| Bisulfite_reads G2A | 765602395 | 44.55 % | 383002192 | 44.57 % | 382600203 | 44.52 % |
| Concept | Value |
|---|---|
| Unique Fragments | 581504189 |
| Average Unique | 67.67 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 62048940108 | 35.18 % | 26480687194 | 29.85 % | 35568252914 | 40.58 % |
| Base Counts Overall C | 25085751968 | 14.22 % | 1498685608 | 1.69 % | 23587066360 | 26.91 % |
| Base Counts Overall G | 25346969422 | 14.37 % | 24109427125 | 27.17 % | 1237542297 | 1.41 % |
| Base Counts Overall T | 61726633549 | 35.00 % | 35620645576 | 40.15 % | 26105987973 | 29.78 % |
| Base Counts Overall N | 2161931123 | 1.23 % | 1012245029 | 1.14 % | 1149686094 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9916607312000145 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 777465949 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 705991527 |
| 108 | 153307842 |
| 101 | 859299369 |
| Insert Size Histogram |
|---|
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