/EXTERNAL Roadmap/K006497_K006498_2_lane_gembs/SRX259085_5_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1649230698 | 100.00 % | 824615349 | 100.00 % | 824615349 | 100.00 % |
| General Reads | 1601545084 | 97.11 % | 804045388 | 97.51 % | 797499696 | 96.71 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 2 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 47685611 | 2.89 % | 20569959 | 2.49 % | 27115652 | 3.29 % |
| Bisulfite_reads C2T | 842498382 | 51.08 % | 423046309 | 51.30 % | 419452073 | 50.87 % |
| Bisulfite_reads G2A | 759046705 | 46.02 % | 380999081 | 46.20 % | 378047624 | 45.85 % |
| Concept | Value |
|---|---|
| Unique Fragments | 616863231 |
| Average Unique | 74.81 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 58548676245 | 35.15 % | 23681977278 | 28.43 % | 34866698967 | 41.86 % |
| Base Counts Overall C | 24228305602 | 14.55 % | 1606457294 | 1.93 % | 22621848308 | 27.16 % |
| Base Counts Overall G | 24019072438 | 14.42 % | 22590717343 | 27.12 % | 1428355095 | 1.71 % |
| Base Counts Overall T | 57964471786 | 34.80 % | 34572105642 | 41.51 % | 23392366144 | 28.09 % |
| Base Counts Overall N | 1811774427 | 1.09 % | 834892692 | 1.00 % | 976881735 | 1.17 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 766158240 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 824615349 |
| 100 | 824615349 |
| Insert Size Histogram |
|---|
 |