/EXTERNAL Roadmap/K006497_K006498_2_lane_gembs/SRX259086_3_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 962528228 | 100.00 % | 481264114 | 100.00 % | 481264114 | 100.00 % |
| General Reads | 943624737 | 98.04 % | 472702631 | 98.22 % | 470922106 | 97.85 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 0 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 18903490 | 1.96 % | 8561483 | 1.78 % | 10342007 | 2.15 % |
| Bisulfite_reads C2T | 493410011 | 51.26 % | 247205341 | 51.37 % | 246204670 | 51.16 % |
| Bisulfite_reads G2A | 450214727 | 46.77 % | 225497290 | 46.86 % | 224717437 | 46.69 % |
| Concept | Value |
|---|---|
| Unique Fragments | 366256975 |
| Average Unique | 76.10 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 34134322585 | 35.11 % | 13494950462 | 27.76 % | 20639372123 | 42.46 % |
| Base Counts Overall C | 14436451252 | 14.85 % | 927079042 | 1.91 % | 13509372210 | 27.79 % |
| Base Counts Overall G | 14337079039 | 14.75 % | 13528503642 | 27.83 % | 808575397 | 1.66 % |
| Base Counts Overall T | 33292963354 | 34.25 % | 20160313137 | 41.48 % | 13132650217 | 27.02 % |
| Base Counts Overall N | 1014534798 | 1.04 % | 496829231 | 1.02 % | 517705567 | 1.07 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 456207572 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 481264114 |
| 100 | 481264114 |
| Insert Size Histogram |
|---|
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