/EXTERNAL Roadmap/K006502_K006503_K006504_K006505_4_lane_gembs/SRX259065_4_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1355712590 | 100.00 % | 677856295 | 100.00 % | 677856295 | 100.00 % |
| General Reads | 1309814651 | 96.61 % | 656599197 | 96.86 % | 653215454 | 96.36 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 45897939 | 3.39 % | 21257098 | 3.14 % | 24640841 | 3.64 % |
| Bisulfite_reads C2T | 690116657 | 50.90 % | 346024219 | 51.05 % | 344092438 | 50.76 % |
| Bisulfite_reads G2A | 619697994 | 45.71 % | 310574978 | 45.82 % | 309123016 | 45.60 % |
| Concept | Value |
|---|---|
| Unique Fragments | 433518792 |
| Average Unique | 63.95 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 48582140227 | 35.48 % | 19228466855 | 28.09 % | 29353673372 | 42.87 % |
| Base Counts Overall C | 19465212631 | 14.22 % | 1527576262 | 2.23 % | 17937636369 | 26.20 % |
| Base Counts Overall G | 19893022816 | 14.53 % | 18364875288 | 26.82 % | 1528147528 | 2.23 % |
| Base Counts Overall T | 47589180908 | 34.76 % | 28661539071 | 41.86 % | 18927641837 | 27.65 % |
| Base Counts Overall N | 1397415008 | 1.02 % | 681028319 | 0.99 % | 716386689 | 1.05 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 587591027 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 677856295 |
| 100 | 677856295 |
| Insert Size Histogram |
|---|
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