/EXTERNAL Roadmap/K006502_K006503_K006504_K006505_4_lane_gembs/SRX259066_3_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1082172170 | 100.00 % | 541086085 | 100.00 % | 541086085 | 100.00 % |
| General Reads | 1046132952 | 96.67 % | 523898392 | 96.82 % | 522234560 | 96.52 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 1 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 36039217 | 3.33 % | 17187692 | 3.18 % | 18851525 | 3.48 % |
| Bisulfite_reads C2T | 549700866 | 50.80 % | 275349613 | 50.89 % | 274351253 | 50.70 % |
| Bisulfite_reads G2A | 496432087 | 45.87 % | 248548780 | 45.94 % | 247883307 | 45.81 % |
| Concept | Value |
|---|---|
| Unique Fragments | 364789664 |
| Average Unique | 67.42 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 38517102124 | 35.24 % | 15355742848 | 28.10 % | 23161359276 | 42.38 % |
| Base Counts Overall C | 15866903788 | 14.52 % | 1297302760 | 2.37 % | 14569601028 | 26.66 % |
| Base Counts Overall G | 16260108888 | 14.88 % | 14894177872 | 27.25 % | 1365931016 | 2.50 % |
| Base Counts Overall T | 37555694511 | 34.36 % | 22558506706 | 41.28 % | 14997187805 | 27.44 % |
| Base Counts Overall N | 1099579859 | 1.01 % | 543964399 | 1.00 % | 555615460 | 1.02 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 472914026 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 541086085 |
| 100 | 541086085 |
| Insert Size Histogram |
|---|
 |